BioJava is an open-source project dedicated to providing a Java framework for processing biological data. It provides analytical and statistical routines, parsers for common file formats and allows the manipulation of sequences and 3D structures. The goal of the biojava project is to facilitate rapid application development for bioinformatics.

biosql-1.8.1.jar is the BioSQL module of BioJava 1.8.

JAR File Size and Download Location:

File name: biosql.jar, biosql-1.8.1.jar
File size: 160150 bytes
Date modified: 14-Feb-2011
Download: BioJava - BioSQL

Manifest of the JAR:

Archiver-Version: Plexus Archiver
Built-By: andreas
Build-Jdk: 1.6.0_0

List of Classes in the JAR:

org/biojava/bio/seq/io/SequenceDBSequenceBuilder
org/biojava/bio/seq/db/biosql/BioSQLSequenceDBProvider
org/biojava/bio/seq/db/biosql/BioSQLFeature
org/biojava/bio/seq/db/biosql/BioSQLSequenceDB
org/biojava/bio/seq/db/biosql/MySQLDBHelper
org/biojava/bio/seq/db/biosql/BioSQLSequenceI
org/biojava/bio/seq/db/biosql/BioSQLEntryAnnotationChangeHub
org/biojava/bio/seq/db/biosql/BioSQLAllFeatures
org/biojava/bio/seq/db/biosql/BioSQLTiledFeatures
org/biojava/bio/seq/db/biosql/BioSQLComponentFeature
org/biojava/bio/seq/db/biosql/DBHelper
org/biojava/bio/seq/db/biosql/HypersonicDBHelper
org/biojava/bio/seq/db/biosql/FeaturesSQL
org/biojava/bio/seq/db/biosql/PostgreSQLDBHelper
org/biojava/bio/seq/db/biosql/BioSQLSequence
org/biojava/bio/seq/db/biosql/BioSQLAssembly
org/biojava/bio/seq/db/biosql/TaxonSQL
org/biojava/bio/seq/db/biosql/BioSQLFeatureChangeHub
org/biojava/bio/seq/d b/biosql/OracleDBHelper
org/biojava/bio/seq/db/biosql/OntologySQL
org/biojava/bio/seq/db/biosql/BioSQLFeatureAnnotation
org/biojava/bio/seq/db/biosql/BioSQLFeatureAnnotationChangeHub
org/biojava/bio/seq/db/biosql/BioSQLStrandedFeature
org/biojava/bio/seq/db/biosql/BioSQLFeatureReceiver
org/biojava/bio/seq/db/biosql/BioSQLSequenceAnnotation
org/biojava/bio/seq/db/biosql/UnknownDBHelper
org/biojava/bio/seq/db/biosql/BioSQLEntryChangeHub
org/biojavax/bio/db/biosql/BioSQLRichSequenceHandler
org/biojavax/bio/db/biosql/BioSQLFeatureFilter
org/biojavax/bio/db/biosql/BioSQLCrossReferenceResolver
org/biojavax/bio/db/biosql/BioSQLAcceptAllFilter
org/biojavax/bio/db/biosql/BioSQLAcceptNoneFilter
org/biojavax/bio/db/biosql/BioSQLRichSequenceDB
org/biojavax/bio/db/biosql/BioSQLBioEntryDB
org/biojavax/bio/db/biosql/BioSQLRichObjectBuilder