BioJava is an open-source project dedicated to providing a Java framework for processing biological data. It provides analytical and statistical routines, parsers for common file formats and allows the manipulation of sequences and 3D structures. The goal of the biojava project is to facilitate rapid application development for bioinformatics.

gui-1.8.1.jar is the GUI module of BioJava 1.8.

JAR File Size and Download Location:

File name: gui.jar, gui-1.8.1.jar
File size: 228807 bytes
Date modified: 14-Feb-2011
Download: BioJava - GUI

Manifest of the JAR:

Archiver-Version: Plexus Archiver
Built-By: andreas
Build-Jdk: 1.6.0_0

List of Classes in the JAR:

org/biojava/bio/gui/LogoPainter
org/biojava/bio/gui/TextBlock
org/biojava/bio/gui/PlainStyle
org/biojava/bio/gui/SimpleSymbolStyle
org/biojava/bio/gui/sequence/BasicFeatureRenderer
org/biojava/bio/gui/sequence/TickFeatureRenderer
org/biojava/bio/gui/sequence/FeatureRenderer
org/biojava/bio/gui/sequence/RoundRectangularBeadRenderer
org/biojava/bio/gui/sequence/PairwiseRenderContext
org/biojava/bio/gui/sequence/ImageMapRenderer
org/biojava/bio/gui/sequence/ArrowedFeatureRenderer
org/biojava/bio/gui/sequence/ZiggyFeatureRenderer
org/biojava/bio/gui/sequence/EllipticalBeadRenderer
org/biojava/bio/gui/sequence/AlignmentRenderer
org/biojava/bio/gui/sequence/SequenceRenderer
org/biojava/bio/gui/sequence/PairwiseSequenceRenderer
org/biojava/bio/gui/sequence/RectangularImapRenderer
org/biojava/bio/gui/sequence/RectangularBeadRenderer
org/biojava/bio/gui/sequence/HeadlessRende rContext
org/biojava/bio/gui/sequence/PairwiseSequencePanel
org/biojava/bio/gui/sequence/LayeredRenderer
org/biojava/bio/gui/sequence/SecondaryStructureFeatureRenderer
org/biojava/bio/gui/sequence/SequenceRendererWrapper
org/biojava/bio/gui/sequence/SubSequenceRenderContext
org/biojava/bio/gui/sequence/SequencePanelWrapper
org/biojava/bio/gui/sequence/OffsetRulerRenderer
org/biojava/bio/gui/sequence/PairwiseFilteringRenderer
org/biojava/bio/gui/sequence/SymbolSequenceRenderer
org/biojava/bio/gui/sequence/SequenceViewerListener
org/biojava/bio/gui/sequence/CircularFeatureFilteringRenderer
org/biojava/bio/gui/sequence/tracklayout/TrackLayout
org/biojava/bio/gui/sequence/tracklayout/UserDefinedTrackLayout
org/biojava/bio/gui/sequence/tracklayout/SimpleTrackLayout
org/biojava/bio/gui/sequence/SixFrameZiggyRenderer
org/biojava/bio/gui/sequence/MultiLineRenderer
org/biojava/bio/gui/sequence/SequenceViewerEven t
org/biojava/bio/gui/sequence/SequencePanel
org/biojava/bio/gui/sequence/PeptideDigestRenderer
org/biojava/bio/gui/sequence/BeadFeatureRenderer
org/biojava/bio/gui/sequence/LabelRenderer
org/biojava/bio/gui/sequence/LabelledSequenceRenderer
org/biojava/bio/gui/sequence/SequencePoster
org/biojava/bio/gui/sequence/FeatureLabelRenderer
org/biojava/bio/gui/sequence/FeatureSource
org/biojava/bio/gui/sequence/SequenceViewerMotionListener
org/biojava/bio/gui/sequence/AbstractBeadRenderer
org/biojava/bio/gui/sequence/AbiTraceRenderer
org/biojava/bio/gui/sequence/PaddingRenderer
org/biojava/bio/gui/sequence/CircularRenderer
org/biojava/bio/gui/sequence/SequenceRenderContext
org/biojava/bio/gui/sequence/RulerRenderer
org/biojava/bio/gui/sequence/SubCircularRendererContext
org/biojava/bio/gui/sequence/AbstractPeptideDigestRenderer
org/biojava/bio/gui/sequence/OverlayMarker
org/biojava/bio/gui/sequence/Circu larFeaturesRenderer
org/biojava/bio/gui/sequence/ZiggyImapRenderer
org/biojava/bio/gui/sequence/FeatureBlockSequenceRenderer
org/biojava/bio/gui/sequence/CircularRendererContext
org/biojava/bio/gui/sequence/SequenceViewerSupport
org/biojava/bio/gui/sequence/CircularRendererPanel
org/biojava/bio/gui/sequence/CircularPaddedRenderer
org/biojava/bio/gui/sequence/CrosshairRenderer
org/biojava/bio/gui/sequence/SimpleLabelRenderer
org/biojava/bio/gui/sequence/SubPairwiseRenderContext
org/biojava/bio/gui/sequence/PairwiseOverlayRenderer
org/biojava/bio/gui/sequence/SixFrameRenderer
org/biojava/bio/gui/sequence/StopRenderer
org/biojava/bio/gui/sequence/GlyphFeatureRenderer
org/biojava/bio/gui/sequence/SequenceViewerMotionSupport
org/biojava/bio/gui/sequence/LineInfo
org/biojava/bio/gui/sequence/CircularFeatureRenderer
org/biojava/bio/gui/sequence/BasicImapRenderer
org/biojava/bio/gui/sequence/PairwiseDiagonal Renderer
org/biojava/bio/gui/sequence/StackedFeatureRenderer
org/biojava/bio/gui/sequence/GUITools
org/biojava/bio/gui/sequence/ImageMap
org/biojava/bio/gui/sequence/FilteringRenderer
org/biojava/bio/gui/sequence/BumpedRenderer
org/biojava/bio/gui/sequence/CircularMLR
org/biojava/bio/gui/sequence/OverlayRendererWrapper
org/biojava/bio/gui/sequence/TranslatedSequencePanel
org/biojava/bio/gui/sequence/GappedRenderer
org/biojava/bio/gui/FeatureTree
org/biojava/bio/gui/PlainBlock
org/biojava/bio/gui/BlockPainter
org/biojava/bio/gui/SymbolStyle
org/biojava/bio/gui/BarLogoPainter
org/biojava/bio/gui/DistributionLogo
org/biojava/bio/gui/glyph/TwoHeadedArrowGlyph
org/biojava/bio/gui/glyph/RectangleGlyph
org/biojava/bio/gui/glyph/TurnGlyph
org/biojava/bio/gui/glyph/Glyph
org/biojava/bio/gui/glyph/HelixGlyph
org/biojava/bio/gui/glyph/GlyphUtils
org/biojava/bio/gui/glyph/ArrowGlyph
org/biojava/bi o/gui/StackedLogoPainter
org/biojava/bio/gui/LogoContext
org/biojava/bio/gui/TextLogoPainter
org/biojava/bio/gui/DNAStyle